|
| Date |
16.03.2010 |
| Priority |
Normal |
Description
glite-AMGA_oracle, glite-AMGA_postgres, glite-BDII, glite-CONDOR_utils, glite-CREAM, glite-FTA_oracle, glite-FTM, glite-FTS_oracle, glite-HYDRA_mysql, glite-LB, glite-LFC_mysql, glite-LFC_oracle, glite-LSF_utils, glite-MON, glite-MPI_utils, glite-PX, glite-SCAS, glite-SE_dcache_admin_gdbm, glite-SE_dcache_admin_postgres, glite-SE_dcache_info, glite-SE_dcache_pool, glite-SE_dpm_disk, glite-SE_dpm_mysql, glite-SGE_utils, glite-TORQUE_client, glite-TORQUE_server, glite-TORQUE_utils, glite-UI, glite-VOBOX, glite-VOMS_mysql, glite-VOMS_oracle, glite-WMS, glite-WN, lcg-CE
The LB patch introduces a new version of glite-version.
glite-MON, lcg-CE, glite-TORQUE_utils, glite-CONDOR_utils, glite-SGE_utils, glite-LSF_utils, glite-CREAM
APEL (affecting monbox and utils packages for various batch systems) with several bug fixes
- APEL will now read the CPUScalingReferenceSI00 value from the
site GIIS. If this value is not available, APEL will read
GlueHostbenchmarkSI00.
- SGE log files with format accounting-YYYYMMDD and
accounting-YYYYMMDD.gz are now parsed.
- Entries in the SGE accounting log file with queue name
containing a dot are now read by the APEL parser.
- Out of memory error in parser (for grid-jobmap files)
fixed.
- Problems parsing different versions of LSF log files fixed.
Also fixed parsing of parallel jobs in LSF.
- Removed reference to IPv6 non compliant address in database
script.
- APEL publisher can now use external public keys (from a file)
to encrypt UserDNs. The location of the public key file can be
set up in the publisher configuration file
(/opt/glite/etc/glite-apel-publisher/publisher-config-yaim.conf)
<JoinProcessor
publishGlobalUserName="yes"
publicKeyLocation="/encryption/key/public.der">
Note that the new version of APEL will read the CPU power (specint
rating) from the GlueCECapability CPUScalingReferenceSI00 attribute if
it is published, so please check that the value is correct (the same as
the GlueHostBenchmarkSI00 attribute) and that your APEL accounting
records look OK after the upgrade.
glite-MPI_utils, glite-TORQUE_client, glite-TORQUE_server, glite-TORQUE_utils
New version of MPI_utils
This release of the glite-MPI_utils fixes a long known
dependency issue with an incompatible torque library provided by
the torque RPM.
There have been several updates to glite-yaim-mpi:
- The YAIM
configuration will now look in the YAIM
"services" configuration directory for
configuration details.
- There have been minor changes to the
YAIM MPI configuration scripts which fix some observed problems
relating to variable assignment.
The default MPI installation is now OPENMPI, which is provided
by the Scientific Linux distribution.
Support for MPICH1 and MPICH2 has been discontinued on SL4.
MPICH2 is available for SL5.
The MPI-START scripts have been improved to detect if the user
is compiling code under 64 bit or 32 bit versions of mpicc.
The supplied OPENMPI packages are compiled with support for
Infiniband. If your site does not support infiniband, openmpi will
output warnings. To fix this problem at your site, please see:
http://xmipp.cnb.csic.es/twiki/bin/view/Xmipp/RemoveOpenMPIWarnings The
affected files are:
SL4: /usr/lib/openmpi/1.2.8-gcc/etc/openmpi-mca-params.conf
SL5 /usr/lib64/openmpi/1.2.7-gcc/etc/openmpi-mca-params.conf
The vendor provided version of OpenMPI is not compiled with
Torque support. This affects sites not using shared homes and who
are not using ssh to distribute job related files between worker
nodes.
In order to allow the site to compile and install their own
custom MPI rpms, this metapackage removes the explicit requirement
of any devel and lib packages. Further details on compiling OpenMPI
with torque support can be found under:
https://twiki.cern.ch/twiki/bin/view/EGEE/MpiTools
There is a bug #62612 (
https://savannah.cern.ch/bugs/?62612 ) which hopefully will be
fixed later. This update fixes various bugs. For the full list of bugs, please see list below.
Fixed bugs
| Number | Description |
|
#26518 |
APEL Publisher should imports third party RSA keys |
|
#35770 |
Wrong parsing of the LB events which contains the string ending with '' in field DG.USERTAG.VALUE |
|
#41007 |
Missing Dependency libtorque.so.0 by package mpiexec |
|
#41213 |
IPv6 bug: non compliant address data in source code |
|
#43175 |
APEL SGE parser getting wrong value from SGE log file |
|
#46729 |
APEL cannot parse parallel jobs in LSF |
|
#48163 |
interlogger files may grow indefinitely |
|
#48875 |
[ yaim-mpi ] yaim doesn't configure properly MPI environment on WNs|CE |
|
#51176 |
APEL should read CPUScalingReferenceSI00 from GLUE if available |
|
#52555 |
obsolete version of i2g-mpi-start package in glite production repositories |
|
#52560 |
[ yaim-mpi ] mpirun: <user's executable>: command not found |
|
#53359 |
APEL OutOfMemory exception in parser when parsing too many grid-jobmap files. |
|
#54557 |
OpenMPI should be added to glite-MPI_utils |
|
#54558 |
mpich should be upgraded to mpich2 in glite-MPI_utils |
|
#55482 |
LB server version not published correctly |
|
#56598 |
APEL won't read SGE records with queue containing dots |
|
#56599 |
APEL doesn't read SGE accounting log files with format accounting-YYYYMMDD |
Updated rpms
The RPMs can be updated using yum via
Service reconfiguration after update
Not needed.
Service restart after update
Not needed.
How to apply the fix
- Update the RPMs (see above)
- Update configuration (see above)
- Restart the service if necessary (see above)
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